Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm28450-201ENSMUST00000187349 638 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm32999-201ENSMUST00000192693 562 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm45224-201ENSMUST00000208203 414 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm39404-201ENSMUST00000216350 313 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gzmn-202ENSMUST00000225535 989 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup88Q8CEC0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gm12176-201ENSMUST00000121420 875 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gm7003-201ENSMUST00000195089 312 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gm45433-201ENSMUST00000209386 247 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Gm10076-201ENSMUST00000073238 384 ntBASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms