Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.03□□□□□ -0.16
E4f1Q8CCE9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
E4f1Q8CCE9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Gm13035-201ENSMUST00000117496 342 ntBASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Gm44126-201ENSMUST00000204831 514 ntBASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
E4f1Q8CCE9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.02□□□□□ -0.17
E4f1Q8CCE9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm24231-201ENSMUST00000104315 133 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm14665-201ENSMUST00000122294 557 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm21811-201ENSMUST00000096485 930 ntBASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
E4f1Q8CCE9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms