Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm11700-201ENSMUST00000119409 403 ntBASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm11793-201ENSMUST00000120433 981 ntBASIC10.5□□□□□ -0.73
SprnQ8BWU1 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm7584-201ENSMUST00000175829 940 ntBASIC10.5□□□□□ -0.73
SprnQ8BWU1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm38241-201ENSMUST00000192641 898 ntBASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm6334-201ENSMUST00000207083 228 ntBASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Gm10608-202ENSMUST00000213924 676 ntBASIC10.5□□□□□ -0.73
SprnQ8BWU1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm18935-201ENSMUST00000212692 664 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm9257-201ENSMUST00000221254 232 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.49□□□□□ -0.73
SprnQ8BWU1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SprnQ8BWU1 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.48□□□□□ -0.73
SprnQ8BWU1 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SprnQ8BWU1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SprnQ8BWU1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms