Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm2383-201ENSMUST00000181461 807 ntBASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm5070-201ENSMUST00000177599 862 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4Q8BQZ5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cpsf4Q8BQZ5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 988.9 ms