Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm11637-201ENSMUST00000120601 592 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Smco3Q8BQM7 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco3Q8BQM7 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.77□□□□□ -0.85
Smco3Q8BQM7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm2495-201ENSMUST00000191160 466 ntBASIC9.77□□□□□ -0.85
Smco3Q8BQM7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco3Q8BQM7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms