Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp2bQ8BJF9 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gm14247-201ENSMUST00000120950 237 ntBASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp2bQ8BJF9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm14832-201ENSMUST00000121289 322 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm24845-201ENSMUST00000158034 109 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms