Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc40Q8BI79 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm11531-201ENSMUST00000117614 555 ntBASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm10608-202ENSMUST00000213924 676 ntBASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc40Q8BI79 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm25214-201ENSMUST00000104573 129 ntBASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm11222-201ENSMUST00000119005 738 ntBASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm26956-201ENSMUST00000182176 986 ntBASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm18935-201ENSMUST00000212692 664 ntBASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc40Q8BI79 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms