Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Gm13045-201ENSMUST00000119019 712 ntBASIC11.44□□□□□ -0.58
SynbQ8BI41 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.44□□□□□ -0.58
SynbQ8BI41 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Gm9555-201ENSMUST00000200908 583 ntBASIC11.44□□□□□ -0.58
SynbQ8BI41 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.44□□□□□ -0.58
SynbQ8BI41 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Rmrp-201ENSMUST00000157463 271 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm27438-201ENSMUST00000183480 110 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm18038-201ENSMUST00000197900 485 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
SynbQ8BI41 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.43□□□□□ -0.58
SynbQ8BI41 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.43□□□□□ -0.58
SynbQ8BI41 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynbQ8BI41 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SynbQ8BI41 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.42□□□□□ -0.58
SynbQ8BI41 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SynbQ8BI41 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SynbQ8BI41 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SynbQ8BI41 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SynbQ8BI41 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms