Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf38Q8BI21 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Mir1247-201ENSMUST00000116706 82 ntBASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Gm6023-201ENSMUST00000118217 606 ntBASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Gm14832-201ENSMUST00000121289 322 ntBASIC11.52□□□□□ -0.57
Rnf38Q8BI21 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf38Q8BI21 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm17931-201ENSMUST00000208132 634 ntBASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm5950-201ENSMUST00000213337 772 ntBASIC11.51□□□□□ -0.57
Rnf38Q8BI21 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf38Q8BI21 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms