Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.31□□□□□ -0.44
Trim62Q80V85 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm13035-201ENSMUST00000117496 342 ntBASIC12.31□□□□□ -0.44
Trim62Q80V85 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm11941-201ENSMUST00000119904 610 ntBASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm11450-201ENSMUST00000121144 333 ntBASIC12.31□□□□□ -0.44
Trim62Q80V85 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim62Q80V85 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trim62Q80V85 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.31□□□□□ -0.44
Trim62Q80V85 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim62Q80V85 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim62Q80V85 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim62Q80V85 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm4310-201ENSMUST00000177847 889 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm6905-201ENSMUST00000205729 511 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim62Q80V85 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim62Q80V85 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Rgr-203ENSMUST00000225070 4704 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim62Q80V85 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim62Q80V85 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.3□□□□□ -0.44
Trim62Q80V85 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm23200-201ENSMUST00000104379 132 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm13263-201ENSMUST00000121271 838 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms