Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh8Q7TSK3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm12857-201ENSMUST00000117678 592 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm10051-201ENSMUST00000145209 414 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm23085-201ENSMUST00000157849 293 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.77□□□□□ -0.53
Pcdh8Q7TSK3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm26286-201ENSMUST00000104166 134 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm7851-201ENSMUST00000117574 323 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm8100-201ENSMUST00000182906 988 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms