Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm14660-201ENSMUST00000119809 575 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm14247-201ENSMUST00000120950 237 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm13316-201ENSMUST00000140537 691 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.67□□□□□ -0.86
Vma21Q78T54 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.67□□□□□ -0.86
Vma21Q78T54 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Vma21Q78T54 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Vma21Q78T54 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm13226-201ENSMUST00000117838 404 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm11424-201ENSMUST00000121929 829 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm5370-201ENSMUST00000187187 574 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vma21Q78T54 Gm9136-201ENSMUST00000193368 454 ntBASIC9.66□□□□□ -0.86
Vma21Q78T54 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.66□□□□□ -0.86
Vma21Q78T54 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms