Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timd4Q6U7R4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm14277-201ENSMUST00000121195 360 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm17827-201ENSMUST00000211825 742 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.09□□□□□ -0.63
Timd4Q6U7R4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timd4Q6U7R4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm26286-201ENSMUST00000104166 134 ntBASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm19287-201ENSMUST00000203190 358 ntBASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm43930-201ENSMUST00000203868 845 ntBASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.08□□□□□ -0.64
Timd4Q6U7R4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms