Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm24891-201ENSMUST00000104391 136 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm12165-201ENSMUST00000117047 342 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm5369-201ENSMUST00000217499 588 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm1821-202ENSMUST00000227415 750 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Ntng1-201ENSMUST00000051253 327 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shc4Q6S5L9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm11941-201ENSMUST00000119904 610 ntBASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm4482-201ENSMUST00000200876 742 ntBASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm6905-201ENSMUST00000205729 511 ntBASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.13□□□□□ -0.63
Shc4Q6S5L9 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shc4Q6S5L9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shc4Q6S5L9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shc4Q6S5L9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shc4Q6S5L9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms