Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm10288-201ENSMUST00000084614 537 ntBASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm12176-201ENSMUST00000121420 875 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm5706-201ENSMUST00000181525 993 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm44124-201ENSMUST00000204159 472 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm9797-202ENSMUST00000218003 294 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nudcd1Q6PIP5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nudcd1Q6PIP5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Gm11663-201ENSMUST00000117888 290 ntBASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Mir1943-201ENSMUST00000158276 73 ntBASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms