Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.8□□□□□ -0.2
Nup98Q6PFD9 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Gm25063-201ENSMUST00000104666 94 ntBASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Gm15617-201ENSMUST00000118973 771 ntBASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Gm26976-201ENSMUST00000182929 908 ntBASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.79□□□□□ -0.2
Nup98Q6PFD9 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup98Q6PFD9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm11340-201ENSMUST00000119226 412 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm16397-201ENSMUST00000122201 494 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm7593-201ENSMUST00000187246 644 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm5599-201ENSMUST00000209602 788 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm13117-201ENSMUST00000120894 691 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup98Q6PFD9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms