Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.68□□□□□ -0.38
CtifQ6PEE2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtifQ6PEE2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Rims2-204ENSMUST00000226410 3685 ntBASIC12.67□□□□□ -0.38
CtifQ6PEE2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.67□□□□□ -0.38
CtifQ6PEE2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.67□□□□□ -0.38
CtifQ6PEE2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Gm17208-201ENSMUST00000168388 535 ntBASIC12.67□□□□□ -0.38
CtifQ6PEE2 Gm9063-201ENSMUST00000223299 582 ntBASIC12.67□□□□□ -0.38
CtifQ6PEE2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.67□□□□□ -0.38
CtifQ6PEE2 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CtifQ6PEE2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtifQ6PEE2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm14719-201ENSMUST00000121891 340 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm6007-201ENSMUST00000208170 823 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.66□□□□□ -0.38
CtifQ6PEE2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CtifQ6PEE2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CtifQ6PEE2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CtifQ6PEE2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CtifQ6PEE2 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms