Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm14807-201ENSMUST00000116640 983 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm4862-201ENSMUST00000170405 438 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm9630-201ENSMUST00000178304 885 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm7902-201ENSMUST00000198842 947 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm4604-201ENSMUST00000025040 390 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm14892-201ENSMUST00000117636 267 ntBASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm13117-201ENSMUST00000120894 691 ntBASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm8459-201ENSMUST00000162504 760 ntBASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Gm6722-201ENSMUST00000221586 390 ntBASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Snrnp40Q6PE01 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Snrnp40Q6PE01 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms