Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Rprl1-201ENSMUST00000158050 327 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm2546-201ENSMUST00000182630 991 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm37008-201ENSMUST00000195712 319 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smarcd3Q6P9Z1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gm14247-201ENSMUST00000120950 237 ntBASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gm25043-201ENSMUST00000158604 212 ntBASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms