Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm25214-201ENSMUST00000104573 129 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm38241-201ENSMUST00000192641 898 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm6013-201ENSMUST00000212264 699 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm10608-202ENSMUST00000213924 676 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.06□□□□□ -0.96
Zfp248Q640N4 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Zfp248Q640N4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.05□□□□□ -0.96
Zfp248Q640N4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.05□□□□□ -0.96
Zfp248Q640N4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zfp248Q640N4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms