Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm11858-201ENSMUST00000117935 838 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm14746-201ENSMUST00000120309 741 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm25261-201ENSMUST00000157416 134 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.11□□□□□ -0.95
Foxc1Q61572 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm2991-201ENSMUST00000173338 480 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm38341-201ENSMUST00000195357 515 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm44636-201ENSMUST00000206130 755 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Mir339-201ENSMUST00000083659 96 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm13813-201ENSMUST00000120998 787 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm7809-201ENSMUST00000153199 742 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm22730-201ENSMUST00000158085 171 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm24548-201ENSMUST00000158650 108 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm3890-201ENSMUST00000182416 207 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 V1rg10-201ENSMUST00000183378 937 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Mir8109-201ENSMUST00000184375 117 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm27845-201ENSMUST00000184479 114 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms