Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm28937-201ENSMUST00000185413 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm29400-201ENSMUST00000187208 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm28662-201ENSMUST00000188446 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm28251-201ENSMUST00000188835 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm37318-201ENSMUST00000194325 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm38017-201ENSMUST00000194768 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm37287-201ENSMUST00000195449 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm37793-201ENSMUST00000195548 695 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.38□□□□□ -0.43
Smarcd1Q61466 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd1Q61466 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm13916-201ENSMUST00000117368 628 ntBASIC12.37□□□□□ -0.43
Smarcd1Q61466 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm7940-201ENSMUST00000218195 769 ntBASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm6867-201ENSMUST00000219165 425 ntBASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms