Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Col11a1Q61245 Gm29808-201ENSMUST00000194419 468 ntBASIC13.07□□□□□ -0.32
Col11a1Q61245 Gm43564-201ENSMUST00000196185 211 ntBASIC13.07□□□□□ -0.32
Col11a1Q61245 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Prss23os-202ENSMUST00000179361 1362 ntBASIC13.07□□□□□ -0.32
Col11a1Q61245 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm45527-201ENSMUST00000211052 774 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col11a1Q61245 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm13827-201ENSMUST00000148801 372 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm29067-201ENSMUST00000190821 470 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm43966-201ENSMUST00000203301 612 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm45310-201ENSMUST00000210436 275 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Gm42432-201ENSMUST00000197902 1617 ntBASIC13.06□□□□□ -0.32
Col11a1Q61245 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.06□□□□□ -0.32
Col11a1Q61245 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col11a1Q61245 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col11a1Q61245 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm6158-201ENSMUST00000109467 904 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm24943-201ENSMUST00000158329 433 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm9372-201ENSMUST00000168454 430 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm20781-201ENSMUST00000193154 693 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm21736-201ENSMUST00000195399 693 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Gm4903-201ENSMUST00000210462 405 ntBASIC13.05□□□□□ -0.32
Col11a1Q61245 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col11a1Q61245 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col11a1Q61245 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms