Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mre11Q61216 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Mre11Q61216 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Gm22189-201ENSMUST00000103822 86 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC14.33□□□□□ -0.12
Mre11Q61216 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm24694-201ENSMUST00000180054 110 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Gm27663-201ENSMUST00000184839 110 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Gm38170-201ENSMUST00000195404 816 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm44958-201ENSMUST00000203734 736 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm32025-201ENSMUST00000217960 307 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 AC125539.1-201ENSMUST00000227423 622 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC14.33□□□□□ -0.12
Mre11Q61216 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.33□□□□□ -0.12
Mre11Q61216 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Mre11Q61216 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mre11Q61216 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mre11Q61216 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mre11Q61216 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Mre11Q61216 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Gm13315-201ENSMUST00000120376 991 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Gm13505-201ENSMUST00000121666 817 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Mre11Q61216 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.32□□□□□ -0.12
Mre11Q61216 Gm26185-201ENSMUST00000157692 266 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Gm5866-201ENSMUST00000177881 973 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mre11Q61216 AC207128.2-201ENSMUST00000223708 1924 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.32□□□□□ -0.12
Mre11Q61216 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Mre11Q61216 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mre11Q61216 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mre11Q61216 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mre11Q61216 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mre11Q61216 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC14.31□□□□□ -0.12
Mre11Q61216 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mre11Q61216 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mre11Q61216 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Mre11Q61216 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mre11Q61216 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms