Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm20482-202ENSMUST00000174729 825 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm43962-201ENSMUST00000203898 190 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm9899-201ENSMUST00000065519 555 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim38Q5SZ99 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm15276-201ENSMUST00000145953 498 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm43822-201ENSMUST00000200285 476 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm19287-201ENSMUST00000203190 358 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm13097-201ENSMUST00000210722 397 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm5455-201ENSMUST00000058710 715 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms