Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gm12165-201ENSMUST00000117047 342 ntBASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gm12579-201ENSMUST00000118040 783 ntBASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gm13045-201ENSMUST00000119019 712 ntBASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gm18753-201ENSMUST00000201000 566 ntBASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gm2553-201ENSMUST00000215986 605 ntBASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps54Q5SPW0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm24891-201ENSMUST00000104391 136 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm15595-201ENSMUST00000120840 961 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm6114-201ENSMUST00000182472 968 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm44100-201ENSMUST00000204329 436 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm6867-201ENSMUST00000219165 425 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps54Q5SPW0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm5714-201ENSMUST00000197343 566 ntBASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm6450-201ENSMUST00000200896 574 ntBASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms