Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Gm5419-201ENSMUST00000119301 527 ntBASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav5d-4Q5R1F6 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm38341-201ENSMUST00000195357 515 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm44364-201ENSMUST00000198368 141 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Gm9899-201ENSMUST00000065519 555 ntBASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms