Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm14542-201ENSMUST00000118460 1248 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gm5555-201ENSMUST00000120352 1111 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gm22146-201ENSMUST00000157397 288 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gm22885-201ENSMUST00000157410 107 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Gm8155-201ENSMUST00000216363 1612 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm7537-201ENSMUST00000221660 1414 ntBASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm15744-201ENSMUST00000161734 213 ntBASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm23045-201ENSMUST00000175041 96 ntBASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm11942-201ENSMUST00000180255 345 ntBASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Mir8115-201ENSMUST00000184992 119 ntBASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gm6831-202ENSMUST00000213025 1673 ntBASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim41Q5NCC3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm26616-202ENSMUST00000195676 3107 ntBASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm11422-201ENSMUST00000118925 1103 ntBASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm13328-201ENSMUST00000120816 1020 ntBASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm28877-201ENSMUST00000191349 604 ntBASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm5700-201ENSMUST00000191483 989 ntBASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim41Q5NCC3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Gm8723-201ENSMUST00000166076 820 ntBASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Gm8701-201ENSMUST00000169259 874 ntBASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Gm8756-201ENSMUST00000183250 929 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms