Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm11783-201ENSMUST00000119549 885 ntBASIC12□□□□□ -0.49
Fam196aQ3USH1 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm43380-201ENSMUST00000200421 220 ntBASIC12□□□□□ -0.49
Fam196aQ3USH1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm45592-201ENSMUST00000209605 1043 ntBASIC12□□□□□ -0.49
Fam196aQ3USH1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm19046-201ENSMUST00000221263 1298 ntBASIC12□□□□□ -0.49
Fam196aQ3USH1 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12□□□□□ -0.49
Fam196aQ3USH1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Gm43807-201ENSMUST00000200678 1781 ntBASIC12□□□□□ -0.49
Fam196aQ3USH1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Fam196aQ3USH1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fam196aQ3USH1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm11500-201ENSMUST00000118237 601 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm11957-201ENSMUST00000118304 779 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm13445-201ENSMUST00000121664 307 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm23400-201ENSMUST00000174994 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm26463-201ENSMUST00000175065 101 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm24332-201ENSMUST00000175102 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25959-201ENSMUST00000175112 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm22475-201ENSMUST00000175169 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm22903-201ENSMUST00000175193 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25070-201ENSMUST00000175237 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm24159-201ENSMUST00000175264 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25299-201ENSMUST00000175283 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm23798-201ENSMUST00000175560 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm23802-201ENSMUST00000175565 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25708-201ENSMUST00000177687 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm24370-201ENSMUST00000178007 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm23049-201ENSMUST00000178068 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm28019-201ENSMUST00000178138 101 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25571-201ENSMUST00000178322 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25355-201ENSMUST00000178456 101 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm24975-201ENSMUST00000178492 101 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm23189-201ENSMUST00000178954 102 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm25100-201ENSMUST00000179750 101 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm23064-201ENSMUST00000179866 101 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm9081-201ENSMUST00000182346 991 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm18776-201ENSMUST00000188833 654 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm45481-201ENSMUST00000209717 877 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.99□□□□□ -0.49
Fam196aQ3USH1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms