Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm8704-201ENSMUST00000197181 435 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm43551-201ENSMUST00000197221 440 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm3922-201ENSMUST00000200519 435 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm38227-201ENSMUST00000193036 1602 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ighv13-1-201ENSMUST00000103480 294 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm18857-201ENSMUST00000210421 901 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm44065-201ENSMUST00000203184 3527 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm23027-201ENSMUST00000158771 158 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 AC166491.1-201ENSMUST00000227053 2308 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm15363-201ENSMUST00000118897 631 ntBASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ush2AQ2QI47 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm10291-201ENSMUST00000094175 999 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Sybu-209ENSMUST00000228639 4113 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm12947-201ENSMUST00000116114 420 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm8302-201ENSMUST00000119217 852 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm15369-201ENSMUST00000119681 394 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm38004-201ENSMUST00000192972 357 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms