Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm11949-201ENSMUST00000117640 372 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm38314-201ENSMUST00000195709 625 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm8285-201ENSMUST00000208293 759 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm44551-201ENSMUST00000208804 171 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.43□□□□□ -0.58
Hoxc4Q08624 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc4Q08624 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm11246-201ENSMUST00000120880 345 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm11960-201ENSMUST00000122068 925 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm18367-201ENSMUST00000176139 600 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms