Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Tff1Q08423 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Tff1Q08423 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm10434-201ENSMUST00000101158 471 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm24830-201ENSMUST00000102024 166 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm14263-201ENSMUST00000117955 746 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm14277-201ENSMUST00000121195 360 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.91□□□□□ -0.82
Tff1Q08423 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 B9d1os-201ENSMUST00000137010 674 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.91□□□□□ -0.82
Tff1Q08423 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm25890-201ENSMUST00000177643 165 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm22614-201ENSMUST00000178300 165 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm37986-201ENSMUST00000193285 383 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.91□□□□□ -0.82
Tff1Q08423 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Tff1Q08423 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm10076-201ENSMUST00000073238 384 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm22042-201ENSMUST00000082989 165 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm26232-201ENSMUST00000083360 166 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Gm26110-201ENSMUST00000083971 165 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.91□□□□□ -0.82
Tff1Q08423 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Tff1Q08423 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Tff1Q08423 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.9□□□□□ -0.82
Tff1Q08423 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Tff1Q08423 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
Tff1Q08423 Gm12314-201ENSMUST00000118104 538 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Gm13875-201ENSMUST00000120162 282 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.9□□□□□ -0.82
Tff1Q08423 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Tff1Q08423 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Tff1Q08423 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Tff1Q08423 Gm2260-201ENSMUST00000184965 657 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Gm42937-201ENSMUST00000197360 752 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Gm44958-201ENSMUST00000203734 736 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Gm18212-201ENSMUST00000211678 889 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms