Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm4943-201ENSMUST00000132879 424 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm24294-201ENSMUST00000158295 277 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm9162-201ENSMUST00000182081 991 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Mir6374-201ENSMUST00000184003 107 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm29651-201ENSMUST00000189088 697 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm28833-201ENSMUST00000189671 559 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm20915-201ENSMUST00000191575 663 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm30055-201ENSMUST00000203175 803 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a1Q05722 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Mir339-201ENSMUST00000083659 96 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.02□□□□□ -0.48
Col9a1Q05722 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.02□□□□□ -0.48
Col9a1Q05722 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.02□□□□□ -0.48
Col9a1Q05722 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Col9a1Q05722 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a1Q05722 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm23595-201ENSMUST00000104306 130 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm14892-201ENSMUST00000117636 267 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm16441-201ENSMUST00000138176 924 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm16296-201ENSMUST00000159905 325 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm18330-201ENSMUST00000199246 547 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 BC080696-201ENSMUST00000202858 1218 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm2448-201ENSMUST00000207080 559 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm7082-201ENSMUST00000209880 969 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.02□□□□□ -0.49
Col9a1Q05722 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.02□□□□□ -0.49
Col9a1Q05722 AC183092.2-201ENSMUST00000225542 1153 ntBASIC12.02□□□□□ -0.49
Col9a1Q05722 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms