Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.86□□□□□ -0.67
Scn1bP97952 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Scn1bP97952 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Scn1bP97952 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Scn1bP97952 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.86□□□□□ -0.67
Scn1bP97952 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Scn1bP97952 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.86□□□□□ -0.67
Scn1bP97952 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.86□□□□□ -0.67
Scn1bP97952 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.86□□□□□ -0.67
Scn1bP97952 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.86□□□□□ -0.67
Scn1bP97952 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.86□□□□□ -0.67
Scn1bP97952 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scn1bP97952 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Scn1bP97952 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.85□□□□□ -0.67
Scn1bP97952 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.85□□□□□ -0.67
Scn1bP97952 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.85□□□□□ -0.67
Scn1bP97952 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Scn1bP97952 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Scn1bP97952 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scn1bP97952 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Scn1bP97952 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Scn1bP97952 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Gm11618-201ENSMUST00000117946 267 ntBASIC10.85□□□□□ -0.67
Scn1bP97952 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.85□□□□□ -0.67
Scn1bP97952 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.85□□□□□ -0.67
Scn1bP97952 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.85□□□□□ -0.67
Scn1bP97952 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.85□□□□□ -0.67
Scn1bP97952 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.85□□□□□ -0.67
Scn1bP97952 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.85□□□□□ -0.67
Scn1bP97952 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Scn1bP97952 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.85□□□□□ -0.67
Scn1bP97952 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Scn1bP97952 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
Scn1bP97952 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scn1bP97952 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.85□□□□□ -0.67
Scn1bP97952 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Scn1bP97952 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
Scn1bP97952 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms