Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.18□□□□□ -0.78
Smn1P97801 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.18□□□□□ -0.78
Smn1P97801 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.18□□□□□ -0.78
Smn1P97801 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smn1P97801 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smn1P97801 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.18□□□□□ -0.78
Smn1P97801 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.18□□□□□ -0.78
Smn1P97801 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.18□□□□□ -0.78
Smn1P97801 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.18□□□□□ -0.78
Smn1P97801 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smn1P97801 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
Smn1P97801 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.17□□□□□ -0.78
Smn1P97801 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Smn1P97801 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.17□□□□□ -0.78
Smn1P97801 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Smn1P97801 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smn1P97801 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.17□□□□□ -0.78
Smn1P97801 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Gm43818-201ENSMUST00000200605 466 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.17□□□□□ -0.78
Smn1P97801 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.17□□□□□ -0.78
Smn1P97801 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
Smn1P97801 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smn1P97801 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Smn1P97801 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.17□□□□□ -0.78
Smn1P97801 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.17□□□□□ -0.78
Smn1P97801 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smn1P97801 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smn1P97801 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Smn1P97801 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smn1P97801 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.16□□□□□ -0.78
Smn1P97801 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.16□□□□□ -0.78
Smn1P97801 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.16□□□□□ -0.78
Smn1P97801 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.16□□□□□ -0.78
Smn1P97801 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.16□□□□□ -0.78
Smn1P97801 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smn1P97801 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms