Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trim43bP86448 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43bP86448 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43bP86448 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm27023-201ENSMUST00000182372 285 ntBASIC12.27□□□□□ -0.45
Trim43bP86448 Gm4857-201ENSMUST00000192718 785 ntBASIC12.27□□□□□ -0.45
Trim43bP86448 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim43bP86448 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm22058-201ENSMUST00000083393 310 ntBASIC12.27□□□□□ -0.45
Trim43bP86448 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim43bP86448 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim43bP86448 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.27□□□□□ -0.45
Trim43bP86448 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.27□□□□□ -0.45
Trim43bP86448 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43bP86448 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 Gm8018-201ENSMUST00000173536 789 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Gm2546-201ENSMUST00000182630 991 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trim43bP86448 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.26□□□□□ -0.45
Trim43bP86448 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43bP86448 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43bP86448 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim43bP86448 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.25□□□□□ -0.45
Trim43bP86448 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm13097-201ENSMUST00000210722 397 ntBASIC12.25□□□□□ -0.45
Trim43bP86448 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim43bP86448 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.25□□□□□ -0.45
Trim43bP86448 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.25□□□□□ -0.45
Trim43bP86448 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim43bP86448 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43bP86448 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms