Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm8956-201ENSMUST00000203939 825 ntBASIC10.67□□□□□ -0.7
SgcbP82349 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.67□□□□□ -0.7
SgcbP82349 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.67□□□□□ -0.7
SgcbP82349 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.67□□□□□ -0.7
SgcbP82349 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SgcbP82349 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.67□□□□□ -0.7
SgcbP82349 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SgcbP82349 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SgcbP82349 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.66□□□□□ -0.7
SgcbP82349 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Gm23949-201ENSMUST00000104027 127 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcbP82349 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SgcbP82349 Gm5419-201ENSMUST00000119301 527 ntBASIC10.66□□□□□ -0.7
SgcbP82349 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Gm12266-201ENSMUST00000120311 962 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.66□□□□□ -0.7
SgcbP82349 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Gm23757-201ENSMUST00000158353 100 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Gm16570-201ENSMUST00000161951 436 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Gm37466-201ENSMUST00000195692 652 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
SgcbP82349 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.66□□□□□ -0.7
SgcbP82349 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcbP82349 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SgcbP82349 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcbP82349 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcbP82349 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SgcbP82349 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcbP82349 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms