Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcdP82347 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Mir877-201ENSMUST00000104738 85 ntBASIC11.09□□□□□ -0.63
SgcdP82347 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.09□□□□□ -0.63
SgcdP82347 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.09□□□□□ -0.63
SgcdP82347 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SgcdP82347 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SgcdP82347 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.09□□□□□ -0.63
SgcdP82347 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Gm10268-201ENSMUST00000085340 555 ntBASIC11.09□□□□□ -0.63
SgcdP82347 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SgcdP82347 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SgcdP82347 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcdP82347 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
SgcdP82347 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SgcdP82347 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Gm15808-201ENSMUST00000119046 604 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Gm13369-201ENSMUST00000119442 987 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Gm10156-201ENSMUST00000122364 462 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm26083-201ENSMUST00000157904 193 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.08□□□□□ -0.64
SgcdP82347 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Gm4271-201ENSMUST00000174444 973 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm29199-201ENSMUST00000187766 775 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SgcdP82347 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
SgcdP82347 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcdP82347 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.08□□□□□ -0.64
SgcdP82347 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcdP82347 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.07□□□□□ -0.64
SgcdP82347 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcdP82347 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms