Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.86□□□□□ -0.35
PrkcbP68404 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
PrkcbP68404 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.86□□□□□ -0.35
PrkcbP68404 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.86□□□□□ -0.35
PrkcbP68404 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PrkcbP68404 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkcbP68404 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PrkcbP68404 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.85□□□□□ -0.35
PrkcbP68404 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm6450-201ENSMUST00000200896 574 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PrkcbP68404 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
PrkcbP68404 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.85□□□□□ -0.35
PrkcbP68404 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PrkcbP68404 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkcbP68404 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.84□□□□□ -0.35
PrkcbP68404 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PrkcbP68404 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
PrkcbP68404 Gm12579-201ENSMUST00000118040 783 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm15595-201ENSMUST00000120840 961 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.84□□□□□ -0.35
PrkcbP68404 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PrkcbP68404 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.84□□□□□ -0.35
PrkcbP68404 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.84□□□□□ -0.35
PrkcbP68404 Gm28937-201ENSMUST00000185413 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm29400-201ENSMUST00000187208 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm28662-201ENSMUST00000188446 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm10774-201ENSMUST00000188689 204 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm28251-201ENSMUST00000188835 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm37318-201ENSMUST00000194325 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm38017-201ENSMUST00000194768 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm37287-201ENSMUST00000195449 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm37793-201ENSMUST00000195548 695 ntBASIC12.84□□□□□ -0.35
PrkcbP68404 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.84□□□□□ -0.35
PrkcbP68404 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkcbP68404 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms