Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Gm25517-201ENSMUST00000083865 134 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ybx1P62960 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.21□□□□□ -0.46
Ybx1P62960 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ybx1P62960 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ybx1P62960 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.2□□□□□ -0.46
Ybx1P62960 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ybx1P62960 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.2□□□□□ -0.46
Ybx1P62960 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.2□□□□□ -0.46
Ybx1P62960 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm25076-201ENSMUST00000104098 132 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.2□□□□□ -0.46
Ybx1P62960 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm37458-201ENSMUST00000194055 410 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Gm38117-201ENSMUST00000194653 939 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm17931-201ENSMUST00000208132 634 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ybx1P62960 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ybx1P62960 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.2□□□□□ -0.46
Ybx1P62960 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.2□□□□□ -0.46
Ybx1P62960 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ybx1P62960 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ybx1P62960 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.19□□□□□ -0.46
Ybx1P62960 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Ybx1P62960 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.19□□□□□ -0.46
Ybx1P62960 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.19□□□□□ -0.46
Ybx1P62960 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Gm24844-201ENSMUST00000158679 127 ntBASIC12.19□□□□□ -0.46
Ybx1P62960 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.19□□□□□ -0.46
Ybx1P62960 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.19□□□□□ -0.46
Ybx1P62960 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.19□□□□□ -0.46
Ybx1P62960 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ybx1P62960 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ybx1P62960 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.19□□□□□ -0.46
Ybx1P62960 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms