Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nup43P59235 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.24□□□□□ -0.61
Nup43P59235 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nup43P59235 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nup43P59235 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.24□□□□□ -0.61
Nup43P59235 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Gm24990-201ENSMUST00000157406 323 ntBASIC11.24□□□□□ -0.61
Nup43P59235 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.24□□□□□ -0.61
Nup43P59235 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.24□□□□□ -0.61
Nup43P59235 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nup43P59235 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Nup43P59235 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup43P59235 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup43P59235 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Nup43P59235 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Nup43P59235 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nup43P59235 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Gm14028-201ENSMUST00000117434 479 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Nup43P59235 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.23□□□□□ -0.61
Nup43P59235 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Gm27341-201ENSMUST00000183570 106 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup43P59235 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup43P59235 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Nup43P59235 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.23□□□□□ -0.61
Nup43P59235 Gm2553-201ENSMUST00000215986 605 ntBASIC11.23□□□□□ -0.61
Nup43P59235 Gm9797-202ENSMUST00000218003 294 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms