Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cacnb3P54285 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cacnb3P54285 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
Cacnb3P54285 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm14942-201ENSMUST00000119642 336 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm24398-201ENSMUST00000157870 109 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm9192-201ENSMUST00000183221 985 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm37981-201ENSMUST00000194280 535 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm43852-201ENSMUST00000202098 917 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm44315-201ENSMUST00000203041 219 ntBASIC13.85□□□□□ -0.19
Cacnb3P54285 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cacnb3P54285 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Gm15744-201ENSMUST00000161734 213 ntBASIC13.84□□□□□ -0.19
Cacnb3P54285 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.84□□□□□ -0.19
Cacnb3P54285 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.84□□□□□ -0.19
Cacnb3P54285 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cacnb3P54285 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.84□□□□□ -0.19
Cacnb3P54285 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacnb3P54285 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.83□□□□□ -0.19
Cacnb3P54285 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacnb3P54285 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacnb3P54285 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacnb3P54285 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cacnb3P54285 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Gm9136-201ENSMUST00000193368 454 ntBASIC13.83□□□□□ -0.2
Cacnb3P54285 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Gm9139-201ENSMUST00000218817 700 ntBASIC13.83□□□□□ -0.2
Cacnb3P54285 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Cacnb3P54285 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacnb3P54285 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms