Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Gm5616-201ENSMUST00000165252 384 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Gm8741-201ENSMUST00000174736 384 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Gm25072-201ENSMUST00000175233 235 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox3P53784 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.45□□□□□ -0.58
Sox3P53784 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Gm10076-201ENSMUST00000073238 384 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox3P53784 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.45□□□□□ -0.58
Sox3P53784 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.44□□□□□ -0.58
Sox3P53784 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.44□□□□□ -0.58
Sox3P53784 Gm9463-201ENSMUST00000206707 601 ntBASIC11.44□□□□□ -0.58
Sox3P53784 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.44□□□□□ -0.58
Sox3P53784 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.44□□□□□ -0.58
Sox3P53784 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sox3P53784 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox3P53784 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox3P53784 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox3P53784 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox3P53784 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms