Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sox2P48432 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.12□□□□□ -0.63
Sox2P48432 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox2P48432 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox2P48432 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox2P48432 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
Sox2P48432 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.12□□□□□ -0.63
Sox2P48432 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Sox2P48432 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox2P48432 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox2P48432 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Sox2P48432 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox2P48432 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox2P48432 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox2P48432 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sox2P48432 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.12□□□□□ -0.63
Sox2P48432 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox2P48432 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.12□□□□□ -0.63
Sox2P48432 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox2P48432 Gm14247-201ENSMUST00000120950 237 ntBASIC11.11□□□□□ -0.63
Sox2P48432 Rprl1-201ENSMUST00000158050 327 ntBASIC11.11□□□□□ -0.63
Sox2P48432 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Gm25927-201ENSMUST00000175058 117 ntBASIC11.11□□□□□ -0.63
Sox2P48432 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Gm29127-201ENSMUST00000188304 517 ntBASIC11.11□□□□□ -0.63
Sox2P48432 Gm18711-201ENSMUST00000199341 750 ntBASIC11.11□□□□□ -0.63
Sox2P48432 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sox2P48432 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sox2P48432 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sox2P48432 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sox2P48432 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 Erich3-203ENSMUST00000189969 3460 ntBASIC11.11□□□□□ -0.63
Sox2P48432 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox2P48432 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox2P48432 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox2P48432 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox2P48432 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox2P48432 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox2P48432 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox2P48432 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms