Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps4bP46467 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Vps4bP46467 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vps4bP46467 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps4bP46467 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps4bP46467 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vps4bP46467 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm9136-201ENSMUST00000193368 454 ntBASIC12.09□□□□□ -0.47
Vps4bP46467 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.09□□□□□ -0.47
Vps4bP46467 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm45865-201ENSMUST00000211815 945 ntBASIC12.09□□□□□ -0.47
Vps4bP46467 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.09□□□□□ -0.47
Vps4bP46467 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.09□□□□□ -0.47
Vps4bP46467 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps4bP46467 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.09□□□□□ -0.47
Vps4bP46467 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps4bP46467 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps4bP46467 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vps4bP46467 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vps4bP46467 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vps4bP46467 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Gm25214-201ENSMUST00000104573 129 ntBASIC12.08□□□□□ -0.48
Vps4bP46467 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Gm43138-201ENSMUST00000199123 708 ntBASIC12.08□□□□□ -0.48
Vps4bP46467 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps4bP46467 Gm10312-201ENSMUST00000078515 489 ntBASIC12.08□□□□□ -0.48
Vps4bP46467 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps4bP46467 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps4bP46467 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps4bP46467 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms