Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mir1982-201ENSMUST00000157368 74 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm9396-201ENSMUST00000076703 567 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.47□□□□□ -0.57
Tnfsf4P43488 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Gm13829-201ENSMUST00000119600 138 ntBASIC11.47□□□□□ -0.57
Tnfsf4P43488 Gm7722-201ENSMUST00000120646 741 ntBASIC11.47□□□□□ -0.57
Tnfsf4P43488 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Snora78-201ENSMUST00000158630 128 ntBASIC11.47□□□□□ -0.57
Tnfsf4P43488 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.47□□□□□ -0.57
Tnfsf4P43488 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf4P43488 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gm5187-201ENSMUST00000117317 991 ntBASIC11.46□□□□□ -0.57
Tnfsf4P43488 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms