Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm39288-201ENSMUST00000210554 446 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm5468-202ENSMUST00000227851 682 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm12663-201ENSMUST00000118481 958 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm12791-201ENSMUST00000120788 655 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Mir1905-201ENSMUST00000122779 82 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm25554-201ENSMUST00000158075 113 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl12P40224 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.22□□□□□ -0.45
Cxcl12P40224 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl12P40224 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cxcl12P40224 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cxcl12P40224 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.21□□□□□ -0.45
Cxcl12P40224 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cxcl12P40224 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms