Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm12957-201ENSMUST00000117835 377 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm11803-201ENSMUST00000119966 444 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm16296-201ENSMUST00000159905 325 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm17420-201ENSMUST00000164753 153 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm4271-201ENSMUST00000174444 973 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Proscos-202ENSMUST00000178990 666 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm37922-201ENSMUST00000195596 455 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.25□□□□□ -0.77
Slc6a1P31648 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm27331-201ENSMUST00000183705 60 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.24□□□□□ -0.77
Slc6a1P31648 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms