Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.94□□□□□ -0.66
Nedd8P29595 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Nedd8P29595 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nedd8P29595 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Gm11597-201ENSMUST00000121423 964 ntBASIC10.94□□□□□ -0.66
Nedd8P29595 Gm13123-201ENSMUST00000122173 492 ntBASIC10.94□□□□□ -0.66
Nedd8P29595 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.94□□□□□ -0.66
Nedd8P29595 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Gm8000-201ENSMUST00000188378 592 ntBASIC10.94□□□□□ -0.66
Nedd8P29595 Gm37042-201ENSMUST00000193816 581 ntBASIC10.94□□□□□ -0.66
Nedd8P29595 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Nedd8P29595 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Nedd8P29595 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nedd8P29595 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nedd8P29595 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nedd8P29595 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Nedd8P29595 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.93□□□□□ -0.66
Nedd8P29595 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.93□□□□□ -0.66
Nedd8P29595 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm16479-201ENSMUST00000121706 932 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.93□□□□□ -0.66
Nedd8P29595 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm26185-201ENSMUST00000157692 266 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.93□□□□□ -0.66
Nedd8P29595 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm7730-201ENSMUST00000212486 454 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nedd8P29595 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nedd8P29595 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.93□□□□□ -0.66
Nedd8P29595 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nedd8P29595 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.92□□□□□ -0.66
Nedd8P29595 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms