Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tpm3P21107 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.31□□□□□ -0.28
Tpm3P21107 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.31□□□□□ -0.28
Tpm3P21107 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tpm3P21107 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm3P21107 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.3□□□□□ -0.28
Tpm3P21107 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Tpm3P21107 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Tpm3P21107 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm3P21107 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.3□□□□□ -0.28
Tpm3P21107 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm3P21107 Gm13315-201ENSMUST00000120376 991 ntBASIC13.3□□□□□ -0.28
Tpm3P21107 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.3□□□□□ -0.28
Tpm3P21107 Igkv2-116-201ENSMUST00000199327 362 ntBASIC13.3□□□□□ -0.28
Tpm3P21107 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.3□□□□□ -0.28
Tpm3P21107 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.3□□□□□ -0.28
Tpm3P21107 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.3□□□□□ -0.28
Tpm3P21107 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm3P21107 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tpm3P21107 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Tpm3P21107 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Tpm3P21107 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Gm26660-202ENSMUST00000223620 4112 ntBASIC13.3□□□□□ -0.28
Tpm3P21107 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tpm3P21107 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tpm3P21107 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.29□□□□□ -0.28
Tpm3P21107 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.29□□□□□ -0.28
Tpm3P21107 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.29□□□□□ -0.28
Tpm3P21107 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Proscos-202ENSMUST00000178990 666 ntBASIC13.29□□□□□ -0.28
Tpm3P21107 Gm4768-201ENSMUST00000206199 686 ntBASIC13.29□□□□□ -0.28
Tpm3P21107 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.29□□□□□ -0.28
Tpm3P21107 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.29□□□□□ -0.28
Tpm3P21107 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tpm3P21107 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm3P21107 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Tpm3P21107 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.29□□□□□ -0.28
Tpm3P21107 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Gm37954-201ENSMUST00000195400 2071 ntBASIC13.28□□□□□ -0.28
Tpm3P21107 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.28□□□□□ -0.28
Tpm3P21107 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tpm3P21107 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm3P21107 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms